Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7236

Experiment: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15603 and 15604 are separated by 596 nucleotides15604 and 15605 are separated by 282 nucleotides mRNA_7235: 15603 - Hypothetical Protein, at 1,191,268 to 1,192,067 15603 mRNA_7236: 15604 - Hypothetical Protein, at 1,192,664 to 1,193,230 15604 mRNA_7237: 15605 - Hypothetical Protein, at 1,193,513 to 1,195,819 15605

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
1,191,669 + 15603 mRNA_7235 0.50 +0.9
1,191,669 + 15603 mRNA_7235 0.50 +2.1
1,191,683 + 15603 mRNA_7235 0.52 -0.5
1,191,728 + 15603 mRNA_7235 0.57 +0.8
1,191,732 - 15603 mRNA_7235 0.58 -0.5
1,191,762 - 15603 mRNA_7235 0.62 +1.6
1,191,777 - 15603 mRNA_7235 0.64 +0.6
1,191,787 + 15603 mRNA_7235 0.65 +1.7
1,191,924 - 15603 mRNA_7235 0.82 -1.0
1,192,054 - -0.4
1,192,159 - +1.2
1,192,330 - +0.1
1,192,418 + +1.3
1,192,555 - +0.5
1,192,562 + +0.8
1,192,831 + 15604 mRNA_7236 0.29 +2.0
1,192,862 - 15604 mRNA_7236 0.35 -1.5
1,193,178 - -1.1
1,193,190 + +1.2
1,193,307 - +0.1
1,193,346 - +1.3
1,193,593 + -0.6
1,193,688 + -0.7

Or see this region's nucleotide sequence