Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7299

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_7299: 15667 - KOG1721 FOG Zn-finger, at 1,332,620 to 1,333,113 15667

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,331,681 - +0.3
1,331,821 - -0.8
1,331,980 - -0.1
1,332,131 - -0.8
1,332,173 - +3.0
1,332,187 - -0.5
1,332,283 - +0.2
1,332,319 + -0.3
1,332,396 + +0.0
1,332,489 + +0.5
1,332,692 - 15667 mRNA_7299 0.15 -0.4
1,332,786 + 15667 mRNA_7299 0.34 +0.5
1,332,789 + 15667 mRNA_7299 0.34 +0.5
1,332,828 - 15667 mRNA_7299 0.42 +0.1
1,332,882 - 15667 mRNA_7299 0.53 +1.9
1,332,884 - 15667 mRNA_7299 0.53 -0.4
1,332,886 + 15667 mRNA_7299 0.54 +1.1
1,332,886 - 15667 mRNA_7299 0.54 -0.9
1,332,902 + 15667 mRNA_7299 0.57 +0.6
1,332,917 - 15667 mRNA_7299 0.60 +0.2
1,332,919 + 15667 mRNA_7299 0.61 -1.2
1,332,919 + 15667 mRNA_7299 0.61 +0.1
1,332,945 - 15667 mRNA_7299 0.66 +0.7
1,332,954 + 15667 mRNA_7299 0.68 +0.6
1,332,974 + 15667 mRNA_7299 0.72 -0.0
1,332,977 + 15667 mRNA_7299 0.72 +2.1
1,333,019 - 15667 mRNA_7299 0.81 -2.3
1,333,093 - -0.9
1,333,095 + -0.2
1,333,348 + -0.7
1,333,774 + -0.7
1,333,813 - +1.4
1,333,815 + +0.0

Or see this region's nucleotide sequence