Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7351

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_7351: 15719 - BLAST unknown [Tremella fuciformis], at 71,503 to 72,321 15719

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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70,634 - +0.3
70,653 + -0.3
70,788 - -0.5
70,792 - -0.2
70,807 + +0.1
70,830 + +0.0
70,908 + +0.5
70,954 - +1.2
71,079 - -0.2
71,089 - -0.5
71,094 - +1.7
71,097 - -0.1
71,101 + +1.7
71,108 - +0.1
71,121 + +0.6
71,389 + +0.2
71,603 - 15719 mRNA_7351 0.12 +0.3
71,715 - 15719 mRNA_7351 0.26 +0.8
71,739 - 15719 mRNA_7351 0.29 -0.9
71,909 - 15719 mRNA_7351 0.50 -0.1
72,062 - 15719 mRNA_7351 0.68 -0.2
72,238 - 15719 mRNA_7351 0.90 +0.9
72,507 + +0.6
72,509 - +0.3
72,510 + +0.3
72,525 - -0.1
72,532 - -0.4
72,533 + +0.3
72,537 + +0.6
72,545 + -0.6
72,547 + +1.2
72,640 - +1.4
72,648 - -0.4
72,657 - +0.5
72,658 - -0.5
72,658 - +0.6
72,666 + +0.7
72,668 + -0.2
72,701 - +0.6
72,708 + -2.2
72,712 + -0.0
72,716 + +0.1
72,847 - +0.1
72,853 - +1.7
72,855 - +0.2
72,857 - -2.3
72,869 + -0.9
72,871 - +2.0
72,876 + +0.6
72,885 + +0.2
72,911 - -0.0
73,010 - -1.9
73,015 - +0.7
73,039 + +0.9
73,045 + -0.6
73,049 + -0.1
73,151 + -0.1
73,189 - -0.3
73,239 - -1.5

Or see this region's nucleotide sequence