Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7458

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15825 and 15826 are separated by 511 nucleotides mRNA_7457: 15825 - Hypothetical Protein, at 317,790 to 319,145 15825 mRNA_7458: 15826 - BLAST proteophosphoglycan protein, putative [Rhizoctonia so..., at 319,657 to 320,898 15826

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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318,891 + 15825 mRNA_7457 0.81 +0.9
318,909 + 15825 mRNA_7457 0.83 +1.2
318,939 + 15825 mRNA_7457 0.85 +1.1
318,959 - 15825 mRNA_7457 0.86 +2.0
319,092 + +1.3
319,244 - +0.3
319,381 - +0.5
319,494 + +0.2
319,524 - -0.8
319,527 - -0.0
319,527 + -0.6
319,689 + -0.5
320,432 + 15826 mRNA_7458 0.62 -0.3
320,736 + 15826 mRNA_7458 0.87 -0.5
320,841 + +1.4
320,851 - +0.1
320,869 + -0.3
320,874 + +0.1
321,035 + +1.5
321,148 + +2.4
321,152 + -0.4
321,162 - +0.9
321,281 - +0.4
321,303 - -0.5
321,325 + +0.9
321,452 + +0.1
321,453 + +0.6
321,463 - +0.8
321,465 + +0.1
321,482 + -0.1
321,602 - +0.5
321,889 - +0.9

Or see this region's nucleotide sequence