Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7714

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16081 and 16082 are separated by 464 nucleotides16082 and 16083 are separated by 700 nucleotides mRNA_7713: 16081 - Hypothetical Protein, at 909,762 to 910,518 16081 mRNA_7714: 16082 - Hypothetical Protein, at 910,983 to 911,507 16082 mRNA_7715: 16083 - K05906 PCYOX1, FCLY prenylcysteine oxidase / farnesylcysteine lyase, at 912,208 to 914,199 16083

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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910,912 - +1.0
910,929 + -0.0
910,950 + +0.6
911,059 - 16082 mRNA_7714 0.14 -0.5
911,224 + 16082 mRNA_7714 0.46 -0.3
911,356 + 16082 mRNA_7714 0.71 +3.1
911,405 + 16082 mRNA_7714 0.80 -0.6
911,405 + 16082 mRNA_7714 0.80 -0.8
911,683 - +0.0
911,822 + -0.5
912,027 + -0.9
912,030 + +0.3
912,149 - -0.3
912,215 - +1.3
912,249 + -0.1
912,265 - -0.0
912,369 + -1.1
912,378 + +0.8

Or see this region's nucleotide sequence