Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7734

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16101 and 16102 are separated by 929 nucleotides16102 and 16103 are separated by 215 nucleotides mRNA_7733: 16101 - HMMPfam-DinB superfamily-PF12867, at 950,783 to 951,558 16101 mRNA_7734: 16102 - Hypothetical Protein, at 952,488 to 953,987 16102 mRNA_7735: 16103 - Hypothetical Protein, at 954,203 to 954,907 16103

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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951,587 + -0.3
951,829 - +1.4
951,859 + -0.3
952,610 - +0.3
952,612 + +1.1
952,820 - 16102 mRNA_7734 0.22 +0.3
953,150 + 16102 mRNA_7734 0.44 +0.8
953,439 - 16102 mRNA_7734 0.63 +1.3
953,476 - 16102 mRNA_7734 0.66 +0.3
953,544 + 16102 mRNA_7734 0.70 +0.9
953,621 + 16102 mRNA_7734 0.76 +0.1
953,652 - 16102 mRNA_7734 0.78 +0.0
953,667 + 16102 mRNA_7734 0.79 +0.1
953,757 - 16102 mRNA_7734 0.85 +0.8
953,963 - +1.9
954,250 - -0.4
954,261 + +0.0
954,380 - 16103 mRNA_7735 0.25 +0.2
954,716 + 16103 mRNA_7735 0.73 -0.6
954,721 + 16103 mRNA_7735 0.73 -0.7
954,724 - 16103 mRNA_7735 0.74 -1.0
954,825 - 16103 mRNA_7735 0.88 +0.2
954,927 + +0.8

Or see this region's nucleotide sequence