Experiment: YNB Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertions' strand.
Conventionally, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
16152 and 16153 are separated by 426 nucleotides 16153 and 16154 are separated by 565 nucleotides
mRNA_7784: 16152 - HMMPfam-Tetratricopeptide repeat-PF00515,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1,060,507 to 1,063,006
16152
mRNA_7785: 16153 - HMMPfam-Tetratricopeptide repeat-PF00515,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1,063,433 to 1,065,460
16153
mRNA_7786: 16154 - HMMPfam-Centromere-associated protein K-PF11802, at 1,066,026 to 1,067,472
16154
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Per-strain Table Position Strand Gene Sysname Fraction YNB Glucose remove 1,062,901 + -0.6 1,062,906 + -0.5 1,062,909 - +0.6 1,062,920 + -2.6 1,062,949 + +0.2 1,063,000 - -0.0 1,063,069 - -0.3 1,063,188 - +0.1 1,063,201 + -0.5 1,063,206 + -0.1 1,063,207 - +0.8 1,063,216 - +0.2 1,063,224 + -0.3 1,063,243 + +0.1 1,063,323 - -0.0 1,063,324 - -0.0 1,063,337 - -0.6 1,063,338 + -0.7 1,063,341 - +0.2 1,063,350 - -0.5 1,063,430 - +0.3 1,063,440 + +0.9 1,063,453 - -0.1 1,063,630 + +0.1 1,063,657 + 16153 mRNA_7785 0.11 -0.9 1,063,779 + 16153 mRNA_7785 0.17 -0.1 1,063,936 + 16153 mRNA_7785 0.25 -0.0 1,064,142 - 16153 mRNA_7785 0.35 +0.9 1,064,143 - 16153 mRNA_7785 0.35 -0.2 1,064,203 + 16153 mRNA_7785 0.38 -1.0 1,064,238 - 16153 mRNA_7785 0.40 +0.2 1,064,609 - 16153 mRNA_7785 0.58 +1.0 1,064,650 - 16153 mRNA_7785 0.60 +2.3 1,064,660 - 16153 mRNA_7785 0.61 -0.4 1,064,911 - 16153 mRNA_7785 0.73 +0.3 1,064,952 + 16153 mRNA_7785 0.75 +0.0 1,065,124 + 16153 mRNA_7785 0.83 +1.7 1,065,356 - -1.2 1,065,357 + +1.6 1,065,358 - +1.6 1,065,361 + +0.3 1,065,363 + +1.5 1,065,501 - -2.0 1,065,501 - +0.2 1,065,651 - +0.3 1,065,656 + +0.8 1,065,674 + +0.5 1,065,690 - -0.0 1,065,799 + -0.5 1,065,819 + -0.0 1,066,091 - +0.6 1,066,098 + +0.5 1,066,099 - +0.3 1,066,240 + 16154 mRNA_7786 0.15 +0.1
Or see this region's nucleotide sequence