Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8120

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16487 and 16488 are separated by 985 nucleotides mRNA_8119: 16487 - Hypothetical Protein, at 459,282 to 461,489 16487 mRNA_8120: 16488 - Hypothetical Protein, at 462,475 to 468,297 16488

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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461,537 + -0.2
461,809 + +0.5
462,353 - +1.0
462,415 - -0.8
462,514 - +0.3
462,533 + -1.9
462,543 - -0.0
462,726 + +0.1
463,799 + 16488 mRNA_8120 0.23 -0.3
464,305 + 16488 mRNA_8120 0.31 -1.1
464,585 - 16488 mRNA_8120 0.36 +0.1
464,745 + 16488 mRNA_8120 0.39 +0.2
464,897 + 16488 mRNA_8120 0.42 +0.5
464,899 + 16488 mRNA_8120 0.42 -1.9
464,906 - 16488 mRNA_8120 0.42 -1.1
465,194 - 16488 mRNA_8120 0.47 -1.4
465,200 + 16488 mRNA_8120 0.47 +0.0
465,349 + 16488 mRNA_8120 0.49 -1.3
465,467 - 16488 mRNA_8120 0.51 -0.5
465,530 + 16488 mRNA_8120 0.52 +0.3
465,752 - 16488 mRNA_8120 0.56 -0.4
466,108 + 16488 mRNA_8120 0.62 -0.3
466,127 + 16488 mRNA_8120 0.63 +0.5
466,203 - 16488 mRNA_8120 0.64 +0.3
466,211 + 16488 mRNA_8120 0.64 -1.2
466,326 - 16488 mRNA_8120 0.66 +0.6
466,386 + 16488 mRNA_8120 0.67 +2.4
467,103 + 16488 mRNA_8120 0.79 +0.1
467,119 + 16488 mRNA_8120 0.80 -0.9
467,811 - +0.0
468,436 + +1.2
468,763 - +0.0
468,880 - +0.6
468,886 - +0.7
468,901 + +0.2
468,912 + +0.3
468,914 + -0.3
468,914 + +0.4
468,917 - -0.9
468,922 + +0.2
468,934 + +0.3
468,935 - +1.1
468,936 + -0.3
469,060 + -0.8

Or see this region's nucleotide sequence