Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_330

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8697 and 8698 are separated by 625 nucleotides mRNA_329: 8697 - Hypothetical Protein, at 781,118 to 782,181 8697 mRNA_330: 8698 - KOG2018 Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis, at 782,807 to 784,581 8698

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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781,859 + 8697 mRNA_329 0.70 -0.6
781,862 - 8697 mRNA_329 0.70 +0.8
781,882 - 8697 mRNA_329 0.72 -0.1
781,889 - 8697 mRNA_329 0.72 -0.1
781,895 + 8697 mRNA_329 0.73 +0.4
782,005 - 8697 mRNA_329 0.83 +0.4
782,169 - -1.4
782,312 + +0.0
782,578 - -1.1
782,644 + +0.2
782,780 + -0.2
782,925 - +1.0
783,204 - 8698 mRNA_330 0.22 -1.1
783,220 - 8698 mRNA_330 0.23 +0.7
783,766 - 8698 mRNA_330 0.54 +0.1
783,917 - 8698 mRNA_330 0.63 +0.2
784,092 + 8698 mRNA_330 0.72 +0.3
784,419 - +0.9
784,445 - +2.7
784,631 - +1.6
784,781 + +1.0
784,793 - +0.6
784,796 + +1.0
784,930 - -1.0
784,931 - +0.3
784,931 - -0.1
784,932 + +0.7
784,936 + -1.4
784,939 - +0.3
784,950 + -0.6
784,951 + -1.3
784,961 + -0.3
784,966 + +0.6
784,967 + +0.5
784,969 - -1.1
784,970 - +0.2
784,973 + -0.0
784,979 + -0.6
785,091 - +0.9
785,101 - -1.9
785,247 - +0.8
785,255 - -0.1
785,366 - +0.8
785,381 + -0.6
785,384 - +1.8
785,412 + -0.1
785,414 + -0.4
785,550 + +1.1
785,553 + +2.1
785,556 - -0.1
785,579 - +0.1

Or see this region's nucleotide sequence