Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1083

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9450 and 9451 are separated by 559 nucleotides mRNA_1082: 9450 - Hypothetical Protein, at 368,387 to 368,641 9450 mRNA_1083: 9451 - Hypothetical Protein, at 369,201 to 370,313 9451

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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368,302 - -0.4
368,310 - +0.1
368,331 + -0.8
368,438 - 9450 mRNA_1082 0.20 -0.7
368,439 - 9450 mRNA_1082 0.20 +0.2
368,472 - 9450 mRNA_1082 0.33 +0.8
368,473 - 9450 mRNA_1082 0.34 +1.1
368,505 - 9450 mRNA_1082 0.46 +0.3
368,568 + 9450 mRNA_1082 0.71 +0.5
368,581 - 9450 mRNA_1082 0.76 -0.0
368,608 - 9450 mRNA_1082 0.87 +0.7
368,611 - 9450 mRNA_1082 0.88 +0.8
368,613 + 9450 mRNA_1082 0.89 +0.7
368,649 + +1.2
368,770 + +0.3
368,771 + +0.9
369,221 - +1.8
369,237 + +0.0
369,341 - 9451 mRNA_1083 0.13 -0.2
369,753 - 9451 mRNA_1083 0.50 -0.5
370,476 - -0.1
370,480 + -4.3
370,502 + -0.6
370,621 + +0.3
370,623 + +0.2
370,624 + -1.0
370,638 + -0.3
370,772 - -0.8
370,777 + +1.5
370,794 - +0.5
370,802 + +0.4
370,946 + +0.4
371,219 - +0.3
371,228 + -1.3
371,244 + -0.2

Or see this region's nucleotide sequence