Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1261

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9629 and 9630 are separated by 254 nucleotides mRNA_1261: 9629 - K04712 DEGS sphingolipid Delta-4 desaturase, at 778,890 to 780,707 9629 mRNA_1262: 9630 - KOG4781 Uncharacterized conserved protein, at 780,962 to 782,100 9630

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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778,515 - +1.3
778,596 + +0.9
778,686 + +0.5
778,781 - -0.7
778,797 + +0.3
778,809 + -1.6
778,812 + +1.3
778,817 - +0.9
780,112 - 9629 mRNA_1261 0.67 -0.8
780,729 - +1.2
780,848 + -0.4
781,567 - 9630 mRNA_1262 0.53 +0.7

Or see this region's nucleotide sequence