Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1682

Experiment: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10050 and 10051 are separated by 588 nucleotides mRNA_1682: 10050 - Hypothetical Protein, at 881,676 to 882,111 10050 mRNA_1683: 10051 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 882,700 to 883,622 10051

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
881,176 - -1.4
881,752 + 10050 mRNA_1682 0.17 -0.1
881,876 + 10050 mRNA_1682 0.46 +0.3
881,880 + 10050 mRNA_1682 0.47 -0.1
882,473 + -0.1
882,473 + -0.5
882,477 - -0.0
882,487 - -0.3
882,490 - -0.7
882,491 + +0.6

Or see this region's nucleotide sequence