Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2464

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10831 and 10832 are separated by 775 nucleotides mRNA_2463: 10831 - Hypothetical Protein, at 200,051 to 202,030 10831 mRNA_2464: 10832 - Hypothetical Protein, at 202,806 to 204,474 10832

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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201,958 + -0.4
202,094 + -0.1
202,109 + +0.6
202,117 - -0.6
202,127 - +1.6
202,215 - -0.3
202,218 + +0.9
202,244 - +1.8
202,252 - +0.5
202,255 + +3.1
202,256 - -0.5
202,264 + +0.2
202,266 - +0.6
202,270 - +1.4
202,270 + +2.8
202,279 + -0.4
202,279 - -2.2
202,279 - -0.2
202,282 - +0.1
202,288 + +0.4
202,288 + +0.2
202,328 + +0.8
202,329 - +1.5
202,362 - -0.6
202,376 - +2.3
202,376 - +1.3
202,378 + +2.2
202,378 - -0.5
202,380 - -0.2
202,424 + +0.7
202,427 + +2.3
202,432 - +3.3
202,434 + +1.4
202,439 + -1.5
202,442 - +1.4
202,442 + +0.2
202,444 + +1.2
202,447 + +0.8
202,449 + +1.5
202,450 - +3.4
202,452 + +1.7
202,452 + +1.2
202,458 + +0.6
202,461 - +0.4
202,462 + +0.1
202,465 + +0.8
202,465 - -0.9
202,474 + -0.5
202,476 + +0.1
202,488 + +3.1
202,489 + +0.2
202,491 + +0.2
202,493 + +0.3
202,499 - +0.5
202,501 - +1.3
202,502 + -0.5
202,507 - +0.6
202,520 + +0.1
202,524 + -1.3
202,524 + +0.2
202,525 - +2.4
202,535 - -1.1
202,544 + -0.6
202,546 - +0.9
202,552 - -1.2
202,562 + -0.7
202,580 - -0.7
202,594 + +0.4
202,597 - -0.4
202,625 - -0.9
202,680 - +0.8
202,683 + +1.0
202,695 + -0.1
202,705 - +0.4
202,716 - +1.0
202,730 + +3.3
202,733 - -0.2
202,744 - -0.3
202,769 + -0.2

Or see this region's nucleotide sequence