Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2699

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2699: 11067 - K08066 NFYC nuclear transcription factor Y, gamma, at 34,101 to 34,789 11067

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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33,298 + +1.4
33,479 - -1.2
33,572 - +0.2
33,614 - +0.6
33,636 + -0.9
33,758 + +0.7
33,772 + +0.5
34,186 - 11067 mRNA_2699 0.12 +0.7
34,213 - 11067 mRNA_2699 0.16 -1.2
34,223 + 11067 mRNA_2699 0.18 +0.2
34,791 - -0.2
34,908 - +1.3
35,225 - +1.8
35,345 - +0.7
35,374 - -0.2
35,376 - -0.1
35,537 - -0.7
35,647 + -0.5
35,661 - -1.4

Or see this region's nucleotide sequence