Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2765

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11132 and 11133 are separated by 269 nucleotides11133 and 11134 are separated by 250 nucleotides mRNA_2764: 11132 - Hypothetical Protein, at 163,505 to 164,257 11132 mRNA_2765: 11133 - Hypothetical Protein, at 164,527 to 165,110 11133 mRNA_2766: 11134 - KOG2827 Uncharacterized conserved protein, at 165,361 to 166,420 11134

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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163,530 + +0.1
163,783 + 11132 mRNA_2764 0.37 +2.2
163,964 + 11132 mRNA_2764 0.61 -1.0
164,069 - 11132 mRNA_2764 0.75 +0.7
164,069 - 11132 mRNA_2764 0.75 +0.8
164,072 - 11132 mRNA_2764 0.75 +0.4
164,224 + +0.9
164,240 - +1.5
164,470 - +0.1
164,745 - 11133 mRNA_2765 0.37 -0.6
165,456 + -0.7

Or see this region's nucleotide sequence