Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2916

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2916: 11284 - Hypothetical Protein, at 541,786 to 542,097 11284

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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540,826 - +1.1
541,654 + -0.1
541,663 + -0.7
541,805 - -0.5
542,764 + -1.2
542,766 + +2.0
542,905 + +0.6
543,033 - +1.8
543,049 - -0.9
543,051 - -0.8

Or see this region's nucleotide sequence