Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3020

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11388 and 11389 are separated by 324 nucleotides mRNA_3020: 11388 - Hypothetical Protein, at 114,693 to 115,018 11388 mRNA_3021: 11389 - K00697 otsA trehalose 6-phosphate synthase, at 115,343 to 117,642 11389

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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115,013 + +0.9
115,017 + -0.8
115,071 - +0.0
115,084 + +0.2
115,100 + -0.1
115,101 + -0.3
115,371 + -1.5

Or see this region's nucleotide sequence