Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3906

Experiment: YPD

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	Sysname	Fraction	YPD
864,761	-				+0.1
864,870	-				+3.0
864,921	-				-0.6
865,062	-				+0.1
865,069	+				+1.2
865,221	-				-0.8
865,230	+				+1.0
865,362	+				+2.4
865,363	-				+3.3
865,382	-				+0.2
865,392	+				+3.5
865,503	-				+0.3
865,505	+				+1.2
865,517	+				+0.0
865,525	+				+1.5
865,526	-				-1.2
865,695	-				+1.5
866,320	-	12274	mRNA_3906	0.19	-0.3
866,400	-	12274	mRNA_3906	0.21	-0.1
866,668	+	12274	mRNA_3906	0.30	+2.5
867,124	+	12274	mRNA_3906	0.45	+3.0
867,664	+	12274	mRNA_3906	0.62	-0.4
867,832	+	12274	mRNA_3906	0.68	+0.1
868,276	+	12274	mRNA_3906	0.82	-0.1
868,299	-	12274	mRNA_3906	0.83	-0.9
868,418	-	12274	mRNA_3906	0.87	+0.3
868,555	+				-0.3
868,690	-				-0.2
868,702	+				+0.8
868,878	+				+0.4
869,005	-				+0.2
869,017	+				+1.0
869,164	-	12275	mRNA_3907	0.13	+0.1
869,182	+	12275	mRNA_3907	0.16	-0.9
869,184	-	12275	mRNA_3907	0.16	+1.2
869,782	+				+0.2