Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4579

Experiment: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_4579: 12947 - KOG1399 Flavin-containing monooxygenase, at 508,671 to 511,163 12947

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
507,682 + +0.8
507,721 - +1.1
507,735 + +0.7
507,751 - -0.1
507,775 - +0.2
507,779 - +2.5
507,786 - +0.5
507,800 - -0.3
507,802 - -0.7
507,802 + -0.5
507,807 + +0.2
507,946 + +1.8
507,977 - -2.2
507,990 + -0.2
507,993 - +0.3
507,994 + +0.4
507,996 + +0.7
508,007 - +1.3
508,012 + +0.7
508,033 + +0.2
508,037 + +0.7
508,039 + -0.3
508,042 - -0.4
508,052 - +0.6
508,065 + +0.1
508,084 - -0.3
508,304 + +1.8
508,870 - -0.2
509,022 + 12947 mRNA_4579 0.14 -1.6
510,496 + 12947 mRNA_4579 0.73 -0.4
510,503 + 12947 mRNA_4579 0.73 +1.3
510,629 + 12947 mRNA_4579 0.79 +1.8
510,777 + 12947 mRNA_4579 0.84 +0.5
510,801 + 12947 mRNA_4579 0.85 +1.2
510,932 + +0.2
510,950 + +3.8
511,058 - +0.4
511,064 - -0.4
511,215 - +0.2
511,228 - +0.1
511,236 + -0.1
511,237 - -0.5
511,266 - +1.5
511,276 + +0.5
511,279 + -0.4
511,280 - +0.1
511,296 + +0.8
511,328 + +2.3
511,394 - +1.3
511,413 - +1.5
511,424 + +1.4
511,425 + +0.4
511,537 - +0.8
511,538 - +0.2
511,586 - -1.3
511,690 - -0.1
511,842 - -0.2
511,852 - -0.1
512,140 - -0.4
512,140 + -0.3
512,145 - +2.5
512,155 + +0.5

Or see this region's nucleotide sequence