Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4614

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_4614: 12982 - BLAST B-cell lymphoma/leukemia 11B [Orchesella cincta], at 599,897 to 601,386 12982

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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598,909 - +0.5
599,043 + +0.4
599,058 - -0.8
599,061 + -0.8
599,084 + +3.4
599,095 + +0.7
599,493 - -0.0
599,611 - -0.8
599,905 + +0.1
599,944 + +0.5
600,487 + 12982 mRNA_4614 0.40 +0.3
600,763 - 12982 mRNA_4614 0.58 +0.6
602,271 + +0.2

Or see this region's nucleotide sequence