Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4838

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13206 and 13207 are separated by 254 nucleotides mRNA_4838: 13206 - K00326 E1.6.2.2 cytochrome-b5 reductase, at 1,119,431 to 1,120,749 13206 mRNA_4839: 13207 - K20300 TRAPPC1, BET5 trafficking protein particle complex subunit 1, at 1,121,004 to 1,121,635 13207

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,118,602 + +0.5
1,119,214 + +1.9
1,119,221 + -0.6
1,119,367 - -1.1
1,120,811 + -0.1
1,120,820 + -0.8
1,120,833 + -0.4
1,120,838 + +0.4
1,120,841 + +0.0

Or see this region's nucleotide sequence