Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5185

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5185: 13553 - K01210 E3.2.1.58 glucan 1,3-beta-glucosidase, at 97,438 to 100,447 13553

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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96,449 + +0.4
96,585 + +0.2
96,586 + +1.0
96,601 - +1.4
96,603 + -1.4
96,606 + +1.3
96,610 + -1.1
96,702 - +2.2
96,730 - +0.3
96,732 - +0.7
96,734 - -0.7
96,736 - -1.5
96,751 + +1.0
96,757 + -1.7
96,761 - +1.2
96,765 + +0.0
96,779 - -0.6
96,784 - -1.1
96,787 + +0.3
96,792 - +3.1
96,820 + -0.1
96,896 + +2.6
96,914 + +0.2
96,932 - +0.1
100,504 - +1.1
100,635 + -0.9
100,646 - -0.5
100,687 + -0.8
100,731 - +0.9
100,845 - +0.6
100,851 - -0.4
100,855 - +1.0
101,137 - -0.6

Or see this region's nucleotide sequence