Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5242

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5242: 13610 - K02932 RP-L5e, RPL5 large subunit ribosomal protein L5e, at 243,253 to 244,505 13610

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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242,735 - +0.5
242,741 - +0.1
242,872 + -1.8
242,874 + +1.2
242,876 + -1.6
242,877 - +1.9
242,888 + +0.2
242,900 - -1.1
243,004 - -1.7
243,013 + +2.2
243,033 - +0.1
243,045 + -0.5
243,049 - +0.0
243,052 + +0.9
245,142 + +0.6
245,303 + +2.4
245,426 - +0.4

Or see this region's nucleotide sequence