Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5682

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14049 and 14050 are separated by 87 nucleotides mRNA_5681: 14049 - KOG3146 Dolichyl pyrophosphate phosphatase and related acid phosphatases, at 678,891 to 679,763 14049 mRNA_5682: 14050 - K03349 APC2 anaphase-promoting complex subunit 2, at 679,851 to 681,974 14050

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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678,872 - +0.2
679,743 + +0.8
680,332 - 14050 mRNA_5682 0.23 -0.6

Or see this region's nucleotide sequence