Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6228

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14596 and 14597 are separated by 244 nucleotides mRNA_6228: 14596 - Hypothetical Protein, at 301,912 to 302,184 14596 mRNA_6229: 14597 - K01895 ACSS, acs acetyl-CoA synthetase, at 302,429 to 305,318 14597

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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301,030 + -0.6
301,597 + -0.4
302,242 - +0.0
302,663 - -0.4
302,933 + 14597 mRNA_6229 0.17 -0.5
303,041 + 14597 mRNA_6229 0.21 -1.6
303,055 + 14597 mRNA_6229 0.22 +0.5

Or see this region's nucleotide sequence