Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6352

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14719 and 14720 are separated by 942 nucleotides mRNA_6351: 14719 - K02995 RP-S8e, RPS8 small subunit ribosomal protein S8e, at 612,395 to 613,472 14719 mRNA_6352: 14720 - K02980 RP-S29e, RPS29 small subunit ribosomal protein S29e, at 614,415 to 614,996 14720

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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613,553 - -0.1
613,564 + +0.3
613,564 + +2.2
613,683 + -0.2
613,702 - +1.6
613,707 + +1.6
613,711 + -0.3
613,827 - -0.1
613,828 + -0.5
613,865 + +0.0
613,873 - -0.2
613,947 - +0.4
614,134 - -0.3
615,979 - +1.4

Or see this region's nucleotide sequence