Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6416

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14783 and 14784 are separated by 373 nucleotides14784 and 14785 are separated by 609 nucleotides mRNA_6415: 14783 - Hypothetical Protein, at 756,737 to 757,520 14783 mRNA_6416: 14784 - Hypothetical Protein, at 757,894 to 758,331 14784 mRNA_6417: 14785 - Hypothetical Protein, at 758,941 to 760,073 14785

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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757,119 - 14783 mRNA_6415 0.49 -0.7
757,673 + +0.7
757,681 - +1.1
757,806 + +0.5
757,974 + 14784 mRNA_6416 0.18 +1.4
758,117 + 14784 mRNA_6416 0.51 +1.2
758,270 + 14784 mRNA_6416 0.86 +0.2
758,575 + -1.1
758,586 - +0.9
758,591 - +1.8
758,605 + +0.8
758,605 + +1.8
758,698 - +1.2
758,704 - +0.3
758,891 + -0.8
759,121 + 14785 mRNA_6417 0.16 +0.1
759,141 - 14785 mRNA_6417 0.18 +2.0
759,310 - 14785 mRNA_6417 0.33 +0.2

Or see this region's nucleotide sequence