Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6688

Experiment: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15055 and 15056 are separated by 286 nucleotides15056 and 15057 are separated by 157 nucleotides mRNA_6687: 15055 - BLAST Wings apart-like protein [Xanthophyllomyces dendrorhous], at 1,440,817 to 1,442,910 15055 mRNA_6688: 15056 - BLAST Wings apart-like protein [Ceraceosorus bombacis], at 1,443,197 to 1,445,162 15056 mRNA_6689: 15057 - Hypothetical Protein, at 1,445,320 to 1,449,896 15057

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
1,443,637 - 15056 mRNA_6688 0.22 -0.3
1,443,775 - 15056 mRNA_6688 0.29 -0.3
1,444,521 + 15056 mRNA_6688 0.67 +1.9
1,444,552 - 15056 mRNA_6688 0.69 +1.0
1,445,296 + -0.5
1,445,421 + -1.2
1,445,594 - +0.9
1,445,708 - -1.4

Or see this region's nucleotide sequence