Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7089

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15457 and 15458 are separated by 198 nucleotides mRNA_7089: 15457 - Hypothetical Protein, at 857,242 to 857,760 15457 mRNA_7090: 15458 - Hypothetical Protein, at 857,959 to 859,367 15458

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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856,309 - +0.5
856,448 - +0.8
856,592 - +0.1
856,606 + -0.4
856,733 + +1.9
856,753 - +0.6
856,786 - +0.8
856,787 - +0.4
856,788 - +1.6
856,802 + +0.5
856,802 - -0.3
856,803 - +1.0
856,804 + -1.1
856,804 + +1.2
856,804 + +0.4
856,806 - +2.4
856,806 + +1.4
856,808 + +1.2
856,811 + -0.2
856,876 - +0.8
856,937 - -0.2
856,960 + -0.0
857,098 + +2.5
857,523 - 15457 mRNA_7089 0.54 -0.1
857,838 + -0.8
857,840 - -0.7
858,154 - 15458 mRNA_7090 0.14 -1.2
858,555 - 15458 mRNA_7090 0.42 +0.2

Or see this region's nucleotide sequence