Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7093

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15460 and 15461 are separated by 358 nucleotides mRNA_7092: 15460 - KOG2545 Conserved membrane protein, at 863,308 to 866,540 15460 mRNA_7093: 15461 - K16073 ALR, MNR magnesium transporter, at 866,899 to 868,705 15461

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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866,121 - 15460 mRNA_7092 0.87 -0.6
866,301 + +0.2
866,428 - -0.1
866,428 + +0.5
866,438 + +1.6
866,440 + +0.4
866,444 + +0.6
866,497 + -1.4
866,574 - +1.7
866,584 - +0.9
866,590 - +2.0
866,594 + -0.2
866,598 - +0.5
866,609 - +0.3
866,614 + -0.1
866,621 + -0.3

Or see this region's nucleotide sequence