Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7103

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15471 and 15472 are separated by 552 nucleotides mRNA_7103: 15471 - Hypothetical Protein, at 887,005 to 887,880 15471 mRNA_7104: 15472 - K09448 TEAD transcriptional enhancer factor, at 888,433 to 891,786 15472

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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886,027 - +0.9
886,487 + -0.8
886,641 + +2.9
886,800 + +0.2
886,904 + -1.5
887,521 - 15471 mRNA_7103 0.59 -1.5
887,945 + +2.2
888,098 - +0.3
888,398 + +0.9
888,429 + -2.0
888,669 + +1.8
888,733 + +0.6

Or see this region's nucleotide sequence