Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7266

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15634 and 15635 are separated by 181 nucleotides mRNA_7266: 15634 - Hypothetical Protein, at 1,262,394 to 1,262,742 15634 mRNA_7267: 15635 - Hypothetical Protein, at 1,262,924 to 1,263,981 15635

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,261,420 + +0.8
1,261,434 + -0.5
1,261,599 + +0.7
1,261,706 + -0.8
1,261,707 + +1.2
1,261,715 - +2.5
1,261,812 + -1.1
1,261,883 + +0.7
1,261,943 - +2.2
1,261,979 - +2.2
1,261,999 + +0.9
1,262,027 + -1.5
1,262,027 + +0.9
1,262,329 + +0.3
1,262,467 + 15634 mRNA_7266 0.21 +1.0
1,262,469 - 15634 mRNA_7266 0.21 +1.9
1,262,470 + 15634 mRNA_7266 0.22 +1.0
1,262,716 + -0.5
1,262,756 + +0.9
1,262,763 + +0.2
1,262,912 + +3.0
1,263,052 - 15635 mRNA_7267 0.12 -0.2
1,263,220 + 15635 mRNA_7267 0.28 +0.1
1,263,427 - 15635 mRNA_7267 0.48 +1.9
1,263,495 - 15635 mRNA_7267 0.54 +0.1
1,263,563 - 15635 mRNA_7267 0.60 +1.0
1,263,570 - 15635 mRNA_7267 0.61 +0.3
1,263,573 + 15635 mRNA_7267 0.61 +3.0

Or see this region's nucleotide sequence