Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7374

Experiment: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15741 and 15742 are separated by 926 nucleotides mRNA_7373: 15741 - HMMPfam-FAD binding domain-PF01494,PRINTS-Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature-PR00420,SUPERFAMILY--SSF51905, at 119,953 to 122,182 15741 mRNA_7374: 15742 - Hypothetical Protein, at 123,109 to 123,612 15742

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
122,119 + +1.4
122,266 + +1.3
122,266 + +1.1
122,271 - +1.5
122,306 - -0.9
122,307 + -0.8
122,360 + +0.5
122,401 - -2.3
122,468 + +0.4
122,529 - +0.1
122,557 + -1.7
122,573 + +0.3
122,584 - -1.4
122,586 - -1.6
122,597 + +0.2
122,604 + -1.0
122,625 - -1.2
123,199 + 15742 mRNA_7374 0.18 +0.1
123,648 + +1.2
124,190 + +0.4
124,336 - +1.0
124,447 - +3.1
124,484 - -0.4
124,485 + +0.1
124,516 - +1.5

Or see this region's nucleotide sequence