Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7441

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15809 and 15810 are separated by 425 nucleotides mRNA_7441: 15809 - K08884 K08884 serine/threonine protein kinase, bacterial, at 287,013 to 288,261 15809 mRNA_7442: 15810 - K02886 RP-L2, MRPL2, rplB large subunit ribosomal protein L2, at 288,687 to 290,089 15810

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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286,427 - +0.5
286,583 + -0.0
287,985 + 15809 mRNA_7441 0.78 -0.4
288,151 - -0.6
288,155 - -0.5
288,307 - +0.1
288,457 + -0.1
288,470 + +0.7
288,471 + -0.0
288,477 - +0.4
288,627 - +2.5

Or see this region's nucleotide sequence