Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7502

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15870 and 15871 are separated by 938 nucleotides mRNA_7502: 15870 - K19788 OLA1 obg-like ATPase 1, at 444,835 to 446,831 15870 mRNA_7503: 15871 - Hypothetical Protein, at 447,770 to 449,407 15871

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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443,934 - +1.5
444,542 + +2.2
445,833 + 15870 mRNA_7502 0.50 -0.6
446,577 - 15870 mRNA_7502 0.87 -0.2
446,846 - -0.1
446,879 + -0.8
447,023 + -1.6
447,049 + +0.5
447,161 + -1.9
447,173 + -0.1
447,308 + +1.6
447,443 - +0.9
447,458 + +2.0
447,463 - -1.2
447,590 - +0.5
447,606 - +1.4
447,607 + +2.4
447,610 - +0.1
447,615 - -0.7
447,620 + +0.9
447,635 + -0.0
447,738 + -1.0
447,740 - +0.2
447,770 + +0.9

Or see this region's nucleotide sequence