Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7683

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16050 and 16051 are separated by 265 nucleotides16051 and 16052 are separated by 191 nucleotides mRNA_7682: 16050 - Hypothetical Protein, at 827,950 to 829,213 16050 mRNA_7683: 16051 - K02542 MCM6 DNA replication licensing factor MCM6, at 829,479 to 832,868 16051 mRNA_7684: 16052 - Hypothetical Protein, at 833,060 to 834,277 16052

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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828,819 - 16050 mRNA_7682 0.69 -0.3
828,834 + 16050 mRNA_7682 0.70 +1.7
829,036 + 16050 mRNA_7682 0.86 +1.2
829,131 - -0.4
830,112 - 16051 mRNA_7683 0.19 +0.7
832,925 + +1.1
832,958 + +0.0
832,970 - -1.4
832,972 + -0.2
833,203 + 16052 mRNA_7684 0.12 -0.6
833,401 + 16052 mRNA_7684 0.28 -0.4
833,503 + 16052 mRNA_7684 0.36 +2.2
833,849 - 16052 mRNA_7684 0.65 -0.1

Or see this region's nucleotide sequence