Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7745

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16113 and 16114 are separated by 158 nucleotides mRNA_7745: 16113 - Hypothetical Protein, at 974,845 to 975,369 16113 mRNA_7746: 16114 - Hypothetical Protein, at 975,528 to 976,658 16114

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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973,939 + -0.6
974,109 - +1.4
974,111 + -0.2
974,114 - -0.5
974,119 - +1.0
974,122 + -0.8
974,125 - -0.5
974,127 + -0.3
974,127 + -0.3
974,128 + +1.9
974,128 + +1.3
974,153 + +0.2
974,249 - +1.1
974,249 - +0.3
974,252 - -0.9
974,268 - -1.1
974,269 + -0.2
974,543 + -0.4
974,835 + +2.0
975,274 - 16113 mRNA_7745 0.82 +1.8
975,394 + +1.8
975,396 - +1.7
975,404 - +0.3
975,463 - -0.2
975,480 - +1.0

Or see this region's nucleotide sequence