Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7755

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16122 and 16123 are separated by 526 nucleotides16123 and 16124 are separated by 770 nucleotides mRNA_7754: 16122 - Hypothetical Protein, at 989,641 to 993,184 16122 mRNA_7755: 16123 - Hypothetical Protein, at 993,711 to 994,662 16123 mRNA_7756: 16124 - Hypothetical Protein, at 995,433 to 996,390 16124

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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992,909 - -3.1
992,963 + +1.8
993,396 - +0.3
993,411 + -0.5
993,431 + -0.9
993,559 - +0.8
993,748 + +2.3
993,857 - 16123 mRNA_7755 0.15 -2.0
994,011 - 16123 mRNA_7755 0.32 +2.0
994,154 - 16123 mRNA_7755 0.47 +2.1
994,167 + 16123 mRNA_7755 0.48 +0.5
994,591 + +1.2
994,713 - -0.6
994,721 + +0.6
994,817 + +1.1
995,001 + -0.2
995,097 - +2.0
995,119 - +0.7
995,199 - +0.4
995,313 + +0.6
995,431 + +4.4
995,463 - +1.9

Or see this region's nucleotide sequence