Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7757

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16124 and 16125 are separated by 801 nucleotides16125 and 16126 are separated by 859 nucleotides mRNA_7756: 16124 - Hypothetical Protein, at 995,433 to 996,390 16124 mRNA_7757: 16125 - Hypothetical Protein, at 997,192 to 998,453 16125 mRNA_7758: 16126 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 999,313 to 1,000,093 16126

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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996,296 - +1.3
996,297 - +0.6
996,307 - +1.9
996,319 + -0.7
996,436 - -0.7
996,437 + +1.6
996,483 - -0.3
996,901 - +0.1
997,025 - -0.9
997,201 - -1.2
998,220 - 16125 mRNA_7757 0.81 -0.2
998,722 - -2.2
998,796 + +1.9
998,797 + +1.6
998,817 - +2.3
999,114 - -0.1
999,260 + -0.1
999,269 - -0.5

Or see this region's nucleotide sequence