Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7850

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16217 and 16218 are separated by 990 nucleotides mRNA_7849: 16217 - KOG1529 Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase, at 1,213,713 to 1,217,281 16217 mRNA_7850: 16218 - KOG3291 Ribosomal protein S7, at 1,218,272 to 1,218,817 16218

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,217,484 + -0.5
1,217,529 - +0.3
1,217,690 + +0.3
1,217,761 + -0.1
1,218,014 - +0.5
1,218,961 + +0.1
1,219,018 - -0.2
1,219,653 - +0.1

Or see this region's nucleotide sequence