Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7914

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_7914: 16282 - K10684 UBLE1A, SAE1 ubiquitin-like 1-activating enzyme E1 A, at 8,793 to 10,247 16282

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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7,800 - +0.4
8,115 + +0.6
8,232 - -1.4
8,243 + +1.3
8,396 + +1.9
8,521 + +0.1
8,524 + +3.5
10,441 + -3.2
10,704 - +1.2
10,731 - -0.7
10,737 - +0.9
10,737 + +2.8
10,945 + +0.0
11,145 + +0.3

Or see this region's nucleotide sequence