Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_276

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8643 and 8644 are separated by 230 nucleotides mRNA_275: 8643 - BLAST nitrogen assimilation transcription factor [Rhodo..., at 659,442 to 660,346 8643 mRNA_276: 8644 - K03679 RRP4, EXOSC2 exosome complex component RRP4, at 660,577 to 661,885 8644

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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659,945 - 8643 mRNA_275 0.56 +0.4
660,045 - 8643 mRNA_275 0.67 +1.6
662,192 + +0.5

Or see this region's nucleotide sequence