Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_490

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8857 and 8858 are separated by 254 nucleotides8858 and 8859 are separated by 408 nucleotides mRNA_489: 8857 - K07179 RIOK2 RIO kinase 2, at 1,162,122 to 1,163,780 8857 mRNA_490: 8858 - SUPERFAMILY--SSF52058, at 1,164,035 to 1,165,589 8858 mRNA_491: 8859 - K00850 pfkA, PFK 6-phosphofructokinase 1, at 1,165,998 to 1,167,980 8859
No fitness data for strains in range 1,163,035 to 1,166,589

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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Or see this region's nucleotide sequence