Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_883

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9250 and 9251 are separated by 370 nucleotides mRNA_882: 9250 - K07390 grxD, GLRX5 monothiol glutaredoxin, at 2,105,790 to 2,106,591 9250 mRNA_883: 9251 - Hypothetical Protein, at 2,106,962 to 2,108,755 9251

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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2,106,560 + -0.2
2,107,087 + +0.6
2,109,497 + +1.4
2,109,516 - -0.3
2,109,534 - -0.4
2,109,629 + +0.2
2,109,653 - +0.0
2,109,655 - -0.2
2,109,663 + +0.6
2,109,665 + +1.7
2,109,717 + -0.0

Or see this region's nucleotide sequence