Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_898

Experiment: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9265 and 9266 are separated by 304 nucleotides9266 and 9267 are separated by 592 nucleotides mRNA_897: 9265 - K02955 RP-S14e, RPS14 small subunit ribosomal protein S14e, at 2,141,894 to 2,143,466 9265 mRNA_898: 9266 - K14821 BUD20 bud site selection protein 20, at 2,143,771 to 2,144,401 9266 mRNA_899: 9267 - K00486 KMO kynurenine 3-monooxygenase, at 2,144,994 to 2,146,885 9267

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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2,143,559 + +0.1
2,143,569 - +3.5
2,144,414 + +0.4
2,144,593 + +0.3
2,144,615 - +2.2
2,144,636 + -0.6
2,144,638 - +2.2
2,144,729 + -0.0
2,144,732 - -0.2
2,144,734 + -0.7
2,144,742 + +0.5
2,144,744 - +1.6
2,144,754 + +0.0
2,144,754 + +1.7
2,145,032 - +1.8

Or see this region's nucleotide sequence