Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1275

Experiment: YPD

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	Sysname	Fraction	YPD
812,579	+	9642	mRNA_1274	0.77	-1.8
812,604	+	9642	mRNA_1274	0.78	-0.9
812,687	-	9642	mRNA_1274	0.81	-0.4
813,176	-				+0.7
813,219	-				+0.3
813,470	+				+2.1
813,618	-				+0.5
813,672	+				-0.6
813,740	+	9643	mRNA_1275	0.11	+0.3
813,804	+	9643	mRNA_1275	0.14	+1.3
814,057	+	9643	mRNA_1275	0.25	-0.4
814,450	-	9643	mRNA_1275	0.43	+0.1
814,469	+	9643	mRNA_1275	0.44	+0.1
814,529	+	9643	mRNA_1275	0.46	-1.1
814,532	+	9643	mRNA_1275	0.47	+0.3
814,572	-	9643	mRNA_1275	0.48	-1.4
814,593	-	9643	mRNA_1275	0.49	+0.8
814,601	-	9643	mRNA_1275	0.50	-0.1
814,670	+	9643	mRNA_1275	0.53	+0.6
815,057	+	9643	mRNA_1275	0.70	+0.5
815,061	+	9643	mRNA_1275	0.70	+0.6
815,378	-	9643	mRNA_1275	0.84	-1.3
815,490	-	9643	mRNA_1275	0.89	+0.8
815,500	+	9643	mRNA_1275	0.90	+2.2
815,519	+				+2.7
815,755	-				+0.0
815,790	+				+0.3
815,793	-				-0.3
815,806	+				+2.5
816,101	+	9644	mRNA_1276	0.12	+2.2
816,535	+	9644	mRNA_1276	0.37	+1.5
816,554	+	9644	mRNA_1276	0.39	+0.5